Agriculture News

August 8, 2016

Purdue undergraduates uncover mechanism tied to plant height

dilkes undergrad Brian Dilkes (left), Purdue University associate professor of biochemistry, and his graduate student, Norman Best, led a class exercise that identified a mutation that keeps a certain sunflower variety short. (Purdue Agriculture Communication photo/Tom Campbell) Download image

WEST LAFAYETTE, Ind. - Dwarfed plants add color and a diversity of architectures to landscapes and gardens, and a Purdue University undergraduate class discovered a key mechanism that leads to their small stature.

Graduate student Norman Best led an undergraduate plant physiology class in an exercise that identified a mutation in a dwarf variety of sunflower, called Sunspot, that keeps the plant short. The eight Purdue students, along with scientists that supported the work, published their results in the Journal of the American Society of Horticultural Science.

A group of proteins, containing an amino acid sequence with an abbreviation that spells "DELLA," are responsible for suppressing stem growth in Sunspot. When the plant growth hormone gibberellic acid is perceived, it dislodges DELLA proteins from DNA and leads to stalk growth. The dwarf sunflower contains a mutated a DELLA sequence in one of these proteins. Gibberellic acid is unable to remove the mutant protein, suppressing growth.

"DELLA serves as a guard on the DNA to prevent cells from growing," said Brian Dilkes, an associate professor in the Department of Biochemistry and Best's thesis adviser. "The Green Revolution used mutants of these DELLA guards to redirect the products of photosynthesis from stem growth to seed yield in cereals, such as wheat. But here, the students discovered a mutation responsible for the genetics of aesthetic properties of a landscape variety."

The Green Revolution, beginning in the 1950s, and the scientific findings that came from it, significantly increased agricultural output. The finding that the same genes determine the varieties of form that are valued in landscape ornamental plants unifies horticulture and crop plants at a molecular level. Best's integration of research into the classroom created a richer educational experience while making genuine discoveries worthy of the peer-reviewed literature.

"You can come to Purdue University, take a class, and in the course of your lab work you can do real science where we don't know the answer. Students in the College of Agriculture uncovered new knowledge that has value to the scientific community," Dilkes said.

The class, HORT 301: Plant Physiology, was designed with a structured lab portion meant to give students an authentic, personal experience with the scientific process.

"The goal is to help students to make informed decisions about a particular scientific question, to choose among alternative lines of inquiry, to conduct real experiments using current tools, and ultimately to judge the reliability and significance of their findings," said Robert Joly, a professor of horticulture and co-author of the paper. "This particular outcome grew out of a broader and long-term goal to more effectively foster student learning."

Best said the mechanism could be used to modify ornamental horticultural plants.

"The ability to dwarf a plant is significant for the ornamental industry," Best said. "We could apply this to new varieties by using molecular markers to select for dwarfism and search the genomes of other plants where similar mutations are very likely to have similar effects on architecture."

Writer: Brian Wallheimer, 765-532-0233, brian.wallheimer@gmail.com

Sources: Brian Dilkes 765-494-2584, bdilkes@purdue.edu

Norman Best, 317-590-0345, nbbest@purdue.edu 


ABSTRACT

Helianthus annuus 'Sunspot' is hyposensitive to GA3 and has a missense mutation in the 2 DELLA motif of HaDELLA1 

Norman B. Best1 Xingang Wang1, Scottie Brittsan1, Eric Dean1, Seth J Helfers1, Ryan Homburg1, Mariah L. Mobley1, Tiffeny L. Spindler1, Bofan Xie1, Paul M. Hasegawa1, Robert J. Joly1, David Rhodes1, and Brian P. Dilkes2 

1 Department of Horticulture & Landscape Architecture; Purdue University; West Lafayette, IN,

2 Department of Biochemistry; Purdue University; West Lafayette, IN 

Gibberellin (GA) is a phytohormone that regulates plant height and flowering time in plants. Plants with reduced GA or disrupted in GA signaling exhibit a dwarf phenotype. DELLA proteins are transcriptional repressors that attenuate GA-mediated promotion of plant growth. Alleles which disrupt the eponymous DELLA motif in these proteins result in constitutive repression of GA signaling and a dominantly inherited dwarf phenotype. We found that the dwarf Helianthus annuus variety ‘Sunspot’ is hyposensitive to GA3 as compared to the tall variety ‘Mammoth Grey.’ Sequencing of the HaDELLA1 gene indicates that ‘Sunspot’ has a single nucleotide polymorphism (SNP) resulting in a missense mutation in the DELLA motif not found in ‘Mammoth Grey’ or the reference sequence. Though H. annuus has five genes encoding DELLA proteins, HaDELLA1 is in the same clade as the Arabidopsis DELLA genes GAI, RGA, RGL1, RGL2, and RGL3. We propose that the DELLA motif alteration in the HaDELLA1 gene results in a dominant mutation in ‘Sunspot’ and is the cause of its dwarf phenotype.


Agricultural Communications: (765) 494-2722;
Keith Robinson, robins89@purdue.edu
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