{"id":38,"date":"2018-12-11T09:20:04","date_gmt":"2018-12-11T14:20:04","guid":{"rendered":"https:\/\/www.purdue.edu\/hla\/sites\/hoaglandlab\/?page_id=38"},"modified":"2026-01-21T14:46:00","modified_gmt":"2026-01-21T19:46:00","slug":"publications","status":"publish","type":"page","link":"https:\/\/www.purdue.edu\/hla\/sites\/hoaglandlab\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"<p>Rodriguez-Sanchez, A., Jimenez, M., Filley, T., Brenner, D., Macedo, D., Casa, V., *Hoagland, L., 2026. Variability in cadmium stress and accumulation in quinoa: potential role of crop domestication and selection in mediating differences in resilience and uptake. <em>Science of the Total Environment<\/em><em> <a href=\"https:\/\/doi.org\/10.1016\/j.scitotenv.2025.181058\">https:\/\/doi.org\/10.1016\/j.scitotenv.2025.181058<\/a><\/em><\/p>\n<p>Luis, M., Johnson, L.D., Vega-Vasquez, P., Ristroph, K., Hoagland, L., 2025. Use of cinnamon essential oil nanoemulsions to manage gray mold in tomato. <em>Plant Disease DOI: <a href=\"https:\/\/doi.org\/10.1094\/PDIS-02-25-0261-RE\">10.1094\/PDIS-02-25-0261-RE<\/a><\/em><\/p>\n<p>Terrell, C., Hoagland, L., Ingwell, L., 2025<em>.<\/em> Evaluation of black soldier fly (<em>Hermetia illucens<\/em>) digestate as a soil amendment for vegetable production. <em>Sustainable Agriculture and Environment DOI:<a href=\"https:\/\/doi.org\/10.1002\/sae2.70072?urlappend=%3Futm_source%3Dresearchgate.net%26utm_medium%3Darticle\">10.1002\/sae2.70072<\/a><\/em><\/p>\n<p>Maynard, E.T., Guan, W., Langenhoven, P., Hoagland, L., 2025. Tomato seedling performance in five commercial organic growing media with and without supplemental fertilizer. <em>HortTechnology <span style=\"color: #0000ff\">10.21273\/HORTTECH05594-24<\/span>\u00a0<\/em><\/p>\n<p>Luis, M., Jaiswal, A., Mengiste, T., Myers, J., *Hoagland, L., 2025. Deciphering the mechanisms that regulate variability in induced systemic resistance among tomato genotypes. <em>Phytopathology<\/em> <span class=\"id-label\">DOI: <\/span><a class=\"id-link\" href=\"https:\/\/doi.org\/10.1094\/phyto-07-24-0240-r\" target=\"_blank\" rel=\"noopener\" data-ga-category=\"full_text\" data-ga-action=\"DOI\">10.1094\/PHYTO-07-24-0240-R<\/a><\/p>\n<p>Colley, M., Dawson, J., Zystro, J., Hoagland, L., Liou, M., Myers, J., Silva, E., Simon, P., 2025. Influence of organic and conventional management systems on carrot performance and implications for organic plant breeding. <em>J. of Am. Soc. Hort. Sci.<\/em> doi.org\/10.21273\/JASHS05459-24<\/p>\n<p>Zhang, L., Hoagland, L., Yang, Y., Becchi, P., Sobolev, A., Scioli, G., La Nasa, J., Modugno, F. Lucini, L., 2025. The combination of hyperspectral imaging, untargeted metabolomics and lipidomis highlights a coordinated stress-related biochemical reprogramming triggered by polyethylene nanoparticles in lettuce. <em>Science of the Total Environment<\/em> https:\/\/doi.org\/10.1016\/j.scitotenv.2025.178604<\/p>\n<p>Powlen, J., Bigelow, C., Vidanza, A., Hoagland, L. 2024. Turf-type tall fescue brown path resistance as influenced by morphological characteristics.<em> Plant Health Progress<\/em> https:\/\/doi.org\/10.1094\/PHP-10-23-0082-RS<\/p>\n<p>Maynard, E., Guan, W., Langenhoven, P., Hoagland, L., 2024. Tomato seedling performance in commercial organic growing media.<em> HortTechnology<\/em>\u00a0https:\/\/doi.org\/10.21273\/HORTTECH05244-23<\/p>\n<p>Trivi\u0144o, N., Rodriguez-Sanchez, A., Filley, T., Camberato, J., Colley, M., Simon, P., Hoagland, L.<strong>,<\/strong> 2023. Carrot genotypes differentially alter soil bacterial communities and decomposition of plant residue in soil.<em> Plant and Soil <\/em><u>doi.org\/10.1007\/s11104-023-05892-0<\/u><em> \u00a0<\/em><\/p>\n<p>Souza, A., Zea, M., Yang, Y., Lee, L., Hoagland, L., 2022<em>.<\/em> Classifying cadmium contaminated leafy vegetables using hyperspectral imaging and machine learning. <em>Heylion <\/em><a href=\"https:\/\/doi.org\/10.1016\/j.heliyon.2022.e12256\">org\/10.1016\/j.heliyon.2022.e12256<\/a><\/p>\n<p>Marghoob, M., Rodriguez-Sanchez, A., Imran, A., Mubeen, F., Hoagland, L 2022. Diversity and functional traits of indigenous soil microbial flora associated with salinity and heavy metal concentrations in agricultural fields within the Indus Basin, Pakistan. <em>Frontiers in Microbiology <\/em><u><a href=\"https:\/\/doi.org\/10.3389\/fmicb.2022.1020175\">doi.org\/10.3389\/fmicb.2022.1020175<\/a><\/u><\/p>\n<p>Richardville, K., Egel, D., Flachs, A., <u>Jaiswal, A.<\/u>, Perkins, D., Thompson, A., Hoagland, L. (2022)<em>.<\/em> Leaf mold compost reduces waste, improves soil and microbial properties, and increases tomato productivity. <em>Urban Agriculture and Regional Food Systems.<\/em> <a href=\"https:\/\/doi.org\/10.1002\/uar2.20022\">doi.org\/10.1002\/uar2.20022<\/a>.<\/p>\n<p>Zea, M. Souza, A., Yang, Y., Lee, L., Nemali, K., Hoagland, L. (2022). Leveraging high-throughput hyperspectral imaging technology to detect cadmium stress in two leafy green crops and accelerate soil remediation efforts. <em>Environmental Pollution <a class=\"doi\" title=\"Leveraging high-throughput hyperspectral imaging technology to detect cadmium stress in two leafy green crops and accelerate soil remediation efforts\" href=\"https:\/\/doi.org\/10.1016\/j.envpol.2021.118405\" target=\"_blank\" rel=\"noreferrer noopener\" aria-label=\"Persistent link using digital object identifier\">doi.org\/10.1016\/j.envpol.2021.118405<\/a><\/em><\/p>\n<p>Rodriguez-Sanchez, A., Tomasek, A., McMillan, S., Cruz, S., Mendoza, M., Rondon, R., Hoagland, L. (2022). Composition and potential functional roles of soil fungal communities on arid farms in Arequipa (southern Peru) characterized using SMRT sequencing. <em>Applied Soil Ecology <a class=\"doi\" title=\"Composition and potential functional roles of soil fungal communities on arid farms in Arequipa (southern Peru) characterized using SMRT sequencing\" href=\"https:\/\/doi.org\/10.1016\/j.apsoil.2021.104228\" target=\"_blank\" rel=\"noreferrer noopener\" aria-label=\"Persistent link using digital object identifier\">doi.org\/10.1016\/j.apsoil.2021.104228<\/a><\/em><\/p>\n<p>Rouphael, Y., Colla, G., Hoagland, L., Giordano, M., el-Nakehl, C., Cardarelli, M. (2021). Vegetal-protein hydrolysates based microgranule enhances growth, mineral content and quality traits of vegetable transplants. <em>Scientia Horticulturae <\/em>290:110554<\/p>\n<p>Simon, P., Colley, M., Hoagland, L., Silva, E., Dawson, J., Dutoit, L., Water, T., Roberts, P., Sidhu, J. (2021). Carrot improvement for organic agriculture with added grower and consumer value. <em>Organic World Congress<\/em>, Rennes France<\/p>\n<p>Jaiswal, A., Mengiste, T., Myers, J., Egel, D., Hoagland, L. (2020). Tomato domestication has attenuated responsiveness to a beneficial soil microbe for plant growth promotion and induction of systemic resistance to foliar pathogens. <em>Frontiers in Microbiology<\/em>. Doi: 10.3389\/fmicb.2020.604566<\/p>\n<p>Abdelrazek, S., Choudhari, S., Thimmapuram, Y., Simon, P., Colley, M., Mengiste, T., Hoagland, L. (2020). Changes in the core endophytic mycobiome of carrot taproots in response to crop management and genotype.<em> Scientific Reports<\/em> org\/10.1038\/s41598-020-70683-x.<\/p>\n<p>Cardarelli, M, Rouphael, Y., Coppa, E., Hoagland, L., Colla, G. (2020). Using a microgranular based biostimulant in vegetable transplant production to enhance growth and nitrogen uptake. <em>Agronomy<\/em> DOI:10.3390\/agronomy10060842.<em> \u00a0<\/em><\/p>\n<p>Abdelrazek, S., Simon, P., Colley, M., Mengiste, T., Hoagland, L. (2020). Crop management system and carrot genotype affect endophyte composition and <em>Alternaria dauci<\/em> <em>PLOSOne <\/em><a href=\"https:\/\/doi.org\/10.1371\/journal.pone.0233783\">doi.org\/10.1371\/journal.pone.0233783<\/a>.\u00a0<i>\u00a0<\/i><\/p>\n<p>Ku, S., Ximenes, , Kreke, T., Foster, K., Couetil, J.C., Zhao, X., Hoagland, L., Deering, A.J., Ladisch, M.R., (2019). Microbial enrichment and multiplexed microfiltration for accelerated detection of <em>Salmonella<\/em> in spinach. <em>Biotechnology Progress<\/em> doi: 10.1002\/btpr.2874.\u00a0<i>\u00a0<\/i><\/p>\n<p>Egel, D., Hoagland, L., Davis, J., Marchino, C., Bloomquist, M. (2019). Efficacy of organic disease control products on common foliar diseases of tomato in field and greenhouse trials. <em>Journal of Crop Protection<\/em> 122:90-97<\/p>\n<p>Ximenes, E., Ku, S., Hoagland, L., &amp; Ladish, M. (2019). Accelerated sample preparation for fast<em> Salmonella<\/em> detection in poultry products.\u00a0<em>Foodborne Bacterial Pathogens<\/em>, 3-20<\/p>\n<p>Hoagland, L., Ximenses, E., Ku, S., &amp; Ladisch, M. (2018). Foodborne pathogens in horticultural production systems: ecology and mitigation.\u00a0<em>Scientia Horticulturae<\/em>, 236, 192-206.<\/p>\n<p>Hoagland, L., Colley, M., Dawson, J., Davis, J., Egel, D., Gu, S., Myers, J., Zystro, J. (2018). Tomato management and improvement project (TOMI): An interdisciplinary approach to managing foliar pathogens in tomato. <em>Acta Horticulturae <\/em>1207:203-210<\/p>\n<p>Egel, D., Myers, J., Hoagland, L. (2018). Microbial hitchhikers on seed: friend or foe? 2018 <em>Organic Seed\u00a0<\/em><em>Alliance Biennial Conference<\/em>, Corvallis, OR.<\/p>\n<p>Colla, G., Hoagland, L., Ruzzi, M., Cardarelli, M., Bonini, P., Canaguier, R., &amp; Rouphael, Y. (2017). Biostimulant Action of Protein Hydrolysates: Unraveling Their Effects on Plant Physiology and Microbiome.\u00a0<em>Frontiers in Plant Science<\/em>, 22, 1-14. doi:<a title=\"doi:doi.org\/10.3389\/fpls.2017.02202\" href=\"http:\/\/dx.doi.org\/doi.org\/10.3389\/fpls.2017.02202\">doi.org\/10.3389\/fpls.2017.02202<\/a><\/p>\n<p>Ximenes, E. A., Hoagland, L. A., Ku, S., &amp; Ladisch, M. R. (2017). Human pathogens in biofilms: formation, physiology and detection.\u00a0<em>Biotechnology and Bioengineering<\/em>. doi:<a title=\"doi:10.1002\/bit.26247\" href=\"http:\/\/dx.doi.org\/10.1002\/bit.26247\">10.1002\/bit.26247<\/a><\/p>\n<p>Simon, P., Navazio, J., Colley, M., Hoagland, L,, Roberts, P., DuToit, L., . . . McCluskey, C. (2017). The CIOA Project: Location, cropping system, and genetic background influence carrot performance including top height and flavor.\u00a0<em>Acta Horticulturacea<\/em>. doi:<a title=\"doi:https:\/\/doi.org\/10.17660\/ActaHortic.2017.1153.1\" href=\"http:\/\/dx.doi.org\/https:\/\/doi.org\/10.17660\/ActaHortic.2017.1153.1\">https:\/\/doi.org\/10.17660\/ActaHortic.2017.1153.1<\/a><\/p>\n<p>Reeve, J., Hoagland, L., Villalba, J., Carr, P., Attucha, A., Cambardella, C., . . . Davis (2016). Organic farming, soil health, and food quality: Considering possible linkages.\u00a0<em>Advances in Agronomy<\/em>, 137, 1-49.<\/p>\n<p>Rudisill, M., Turco, R. F., &amp; Hoagland, L. (2016). Rhizosphere effects and fertility management influence nitrification and ammonia oxidizers in intensively managed vegetable production systems.\u00a0<em>Applied Soil Ecology,<\/em> 99, 70-77.<\/p>\n<p>Shoaf, N., Egel, D. S., &amp; Hoagland, L. (2016). Suppression of Phytophthora blight in sweet pepper depends on biochar amendment and soil type.\u00a0<em>Hortscience<\/em>, 51(5), 518-524.<\/p>\n<p>Hallett, S. G., Hoagland, L., and Toner, E. (2016). Urban agriculture: environmental, economic and social perspectives.\u00a0<em>Horticulture Reviews<\/em>, 44, 65-109.<\/p>\n<p>Hoagland, L. (2015). Breeding for beneficial plant-microbial relationships: how do we get there?\u00a0<em>Eucarpia Workshop On Implementing Plant-Microbe interaction in Plant Breeding<\/em>, Weihenstephan, Germany 23-24.<\/p>\n<p>Rudisill, M., Turco, R. F., &amp; Hoagland, L. (2015). Sustaining soil quality in intensively managed high tunnel vegetable production systems; a role for green manures and chicken litter.\u00a0<em>Hortscience<\/em>, 50(3), 461-468.<\/p>\n<p>Hoagland, L., Navazio, J., Zystro, J., Kaplan, I., Gomez Vargas, J., Gibson, K. (2015). Key traits and promising germplasm for an organic participatory tomato breeding program in the U.S. Midwest. <em>HortScience <\/em>50(9):1-8<\/p>\n<p>du Toit, L.J., Derie, M.L., Christianson, C.E., Hoagland, L., and Simon, P. (2014). First Report of Bacterial Blight of Carrot in Indiana Caused by <em>Xanthomonas hortorum <\/em> <em>carotae<\/em>. <em>Plant Disease <\/em>98(5):685.<\/p>\n<p>Hoagland, L., Rudisill, M.\u00a0(2014) Managing soil quality in high tunnels. <em>Great Lakes Fruit and Vegetable EXPO, Grand Rapids, MI<\/em> 56-57.<\/p>\n<p>Hoagland, L., Maynard, C., Cerruti, N., Egel, D., Evard, J., Nava, B., Spencer, S., (2014). Nitrogen release and disease suppressive activity of four organic fertility amendments on three vegetable farms. <em>Great Lakes Fruit and Vegetable EXPO, Grand Rapids, MI<\/em> 13-14.<\/p>\n<p>Borrrelli, K., Koenig, R., Gallagher, R., Pittman, D., Snyder, A., Burke, I., Hoagland, L., Fuerst, E.P. (2012) Alternative strategies for transitioning to organic production in direct seeded grain systems in eastern Washington II: Soil fertility. <em>Journal of Sustainable Agriculture<\/em> 36(4):461-477.<\/p>\n<p>Hoagland, L., Mazzola, M., Murphy, K.M., Jones, S.S., (2012). Wheat varietal selection and annual vs. perennial growth habit impact soil microbial community and apple replant disease suppression. <em>Organic Seed Alliance Conference, Port Townsend, WA<\/em>. pp. 13-15.<\/p>\n<p>Turner, S., Benedict, C., Darby, H., Hoagland, L., Simonson, P., Sirrine, R., and Murphy, K. (2011). Challenges and opportunities of organic hop production in the U.S. <em>Agronomy Journal <\/em>103(5):1645-1654.<\/p>\n<p>TerAvest, D., Smith, J., Carpenter-Boggs, L., Hoagland, L., Granatstein, D., Reganold, J. (2011). Soil carbon pools, N supply, and tree performance under several ground cover systems and compost rates in a young apple orchard. <em>HortScience<\/em> 46(12):1687-1694.<\/p>\n<p>Murphy, K., Hoagland, L., Yan, L., Colley, M., and Jones, S. (2011). Genotype X environmental interaction for mineral nutrient concentration in organically grown spring wheat. <em>Agronomy Journal <\/em>103(6):1734-1741.<\/p>\n<p>Hoagland, L., Hodges, L., Brandle, J.R., Helmers, G.A., and Francis, C. (2011). A decision support tool for optimizing integration of specialty crop enterprises in grain production systems. <em>5<sup>th<\/sup> World Congress of Conservation Agriculture incorporating 3<sup>rd<\/sup> Farming Systems Design Conference, Brisbane, Australia<\/em>. pp. 56-58.<\/p>\n<p>Hoagland, L., Hodges, L., Brandle, J.R., Helmers, G.A, and Francis, C.A. (2010). Labor availability in an integrated agricultural system. <em>Journal of Sustainable Agriculture<\/em> 34(5):532-548.<\/p>\n<p>Gallagher, R.S., Pittman, D., Snyder, A.M., Koenig, R.T., Fuerst, E.P., Burke, I.C., Hoagland, L. (2010). Alternative strategies for the transition to organic production in direct-seeded grain systems in eastern WA I: Crop agronomy. <em>Journal of Sustainable Agriculture<\/em> 34(5):483-503.<\/p>\n<p>TerAvest, D., Smith, J.L., Carpenter-Boggs, L., Hoagland, L., Granatstein, D. and Reganold, J. (2010). Influence of orchard floor management and compost application timing on N partitioning in organically managed apple trees. <em>HortScience<\/em> 45(4):637-642.<\/p>\n<p>Murphy, K., Hoagland, L., Reeves, P., Baik, B., and Jones, S. (2009). Nutritional and quality characteristics expressed in 31 perennial wheat breeding lines. <em>Renewable Agriculture and Food Systems <\/em>24(4):285-292.<\/p>\n<p>Hoagland, L., Murphy, K., Carpenter-Boggs, L., Jones, S. (2008). Improving nutrient uptake in wheat through cultivar specific interaction with <em>Azospirillum<\/em>. <em>Second Scientific Conference of the International Society for Organic Agricultural Research (ISOFAR), Modena, Italy<\/em>. 526-565.<\/p>\n<p>Hoagland, L., Murphy, K., Carpenter-Boggs, Jones, S. (2008).\u00a0 Breeding winter wheat for association with nitrogen-fixing bacteria. <em>Organic Seed Alliance Conference, Salem, OR<\/em>.\u00a0 pp. 97-100.<\/p>\n<p>Hoagland, L., Carpenter-Boggs, L., Granatstein, D., Mazzola, M., Peryea, F., Smith, J., Reganold, J. (2008). Orchard floor management effects on nitrogen fertility and soil biological activity in a newly established organic apple orchard. <em>Biology and<\/em> <em>Fertility of Soils<\/em> 45(1):11-18.<\/p>\n<p>Hoagland, L., Carpenter-Boggs, L., Reganold, J., Mazzola, M. (2008). Role of native soil biology in Brassicaceae seed meal induced weed suppression. <em>Soil Biology and Biochemistry<\/em> 40(7):1689-1697.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Rodriguez-Sanchez, A., Jimenez, M., Filley, T., Brenner, D., Macedo, D., Casa, V., *Hoagland, L., 2026. Variability in cadmium stress and accumulation in quinoa: potential role of crop domestication and selection in mediating differences in resilience and uptake. Science of the Total Environment https:\/\/doi.org\/10.1016\/j.scitotenv.2025.181058 Luis, M., Johnson, L.D., Vega-Vasquez, P., Ristroph, K., Hoagland, L., 2025. Use&#8230;<span id=\"post-label-38\" class=\"sr-only\">Read more about Publications<\/span><a class=\"read-more\" href=\"https:\/\/www.purdue.edu\/hla\/sites\/hoaglandlab\/publications\/\" aria-labelledby=\"post-label-38\">[Read More]<\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_acf_changed":false,"footnotes":""},"class_list":["post-38","page","type-page","status-publish","hentry"],"acf":[],"_links":{"self":[{"href":"https:\/\/www.purdue.edu\/hla\/sites\/hoaglandlab\/wp-json\/wp\/v2\/pages\/38","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.purdue.edu\/hla\/sites\/hoaglandlab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.purdue.edu\/hla\/sites\/hoaglandlab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.purdue.edu\/hla\/sites\/hoaglandlab\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.purdue.edu\/hla\/sites\/hoaglandlab\/wp-json\/wp\/v2\/comments?post=38"}],"version-history":[{"count":28,"href":"https:\/\/www.purdue.edu\/hla\/sites\/hoaglandlab\/wp-json\/wp\/v2\/pages\/38\/revisions"}],"predecessor-version":[{"id":846,"href":"https:\/\/www.purdue.edu\/hla\/sites\/hoaglandlab\/wp-json\/wp\/v2\/pages\/38\/revisions\/846"}],"wp:attachment":[{"href":"https:\/\/www.purdue.edu\/hla\/sites\/hoaglandlab\/wp-json\/wp\/v2\/media?parent=38"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}