August 5, 2003
Purdue scientists discover why were all lefties deep down
WEST LAFAYETTE, Ind. It may be a right-handed world, but recent Purdue University research indicates that the first building blocks of life were lefties and suggests why, on a molecular level, all living things remain southpaws to this day.
In findings that may shed light on the earliest days of evolutionary history, R. Graham Cooks and a team of Purdue chemists have reported experiments that suggest why all 20 of the amino acids that comprise living things exhibit "left-handed chirality," which refers to the direction these basic biological molecules twistand how a single amino acid might be the reason.
Amino acids can be oriented either to the left or the right and possess the same chemical properties regardless of their chirality. But somewhere along the line, living things evolved using only amino acids of the left-handed variety. Scientists have puzzled over the reason for many years, but Cooks group seems to have found the answer: A single amino acid called serine set the standard eons ago, forcing all other biological molecules to follow suit.
"We believe that serine was the first biological molecule to make a chiral choice, possibly one of the root steps in chemical evolution itself," said Cooks, Henry Bohn Hass Distinguished Professor of Analytical Chemistry in Purdues School of Science. "Left-handed serine was able to form clusters with strong bonds, and left-handed serine clusters are able to link to other left-handed amino acids. So once serine took the left fork in the road, only the lefties in the primordial soup got to partner up for the dance of life."
Proteins larger biomolecules followed the lead taken by serine, Cooks said. The study also suggests that the chirality of other biomolecules, such as sugars, was determined by serine as well.
Cooks research, co-authored with Sergio Nanita and Zoltan Takats, doctoral students who are members of Cooks' research group, appears as the cover article in the current issue of the German journal Angewandte Chemie, considered a leading chemistry publication.
Just as books with thousands of words can be written using only 26 letters, the thousands of proteins that form all living things are built out of different combinations of 20 amino acids, which are among the simplest of biological molecules. All molecules exhibit various chemical properties reactivity, solubility in water and so forth but one property that is not as familiar outside chemistry departments is the notion of chirality. Hold a molecule with left-handed chirality up to a mirror, and you see its right-handed sibling, a molecule that generally possesses the same other properties as its lefty variant. But serine, one of the 20 letters in the amino acid "alphabet," is a stickler for chirality in the other molecules with which it associates.
"Most amino acids can form weak bonds with one another regardless of chirality," Cooks said. "Serine is more particular: it forms tightly bound clusters of eight molecules. The clusters, called octamers, are formed of either all right-handed or all left-handed molecules no mixing allowed."
Though it may seem choosy, serine also is tenacious and loyal in its own way. Once formed, the octamers can form strong bonds with other amino acids of the same chirality. They also can form bonds with sugars that have the opposite chirality: a left-handed serine octamer might bond with several other lefty amino acids and some right-handed sugars as well. This bonding might well have occurred early in a sequence of chemical steps that ultimately led to protein in its many forms.
"We believe that in the primordial soup, left-handed serine was sort of the bouncer at lifes dance club," Cooks said. "If you werent a left-handed amino acid, you couldnt get in to partner up and dance. Because of serines ability to form these strong bonds, it essentially forced all other amino acids to twist its way."
The discovery potentially clears up one mystery where in lifes development the choice between left-handed and right-handed chirality was made. But another mystery still remains: If molecules possess virtually the same properties regardless of chirality, why did left-handed serine become the kingpin molecule? Why didnt right-handed serine win out?
"We are not sure whether left-handed serines dominance in the earliest period of lifes prehistory was arbitrary," Cooks said. "But serine can switch its chirality under mild conditions. If somehow polarized light, for example, or a swirling motion in water were present at a critical moment, some of the right-handed clusters could have become left-handed. This could have cascaded into other prebiotic reactions and set the pace for a billion years of evolution."
Cooks admits that these theories cannot be proven completely, and will concentrate his next efforts on determining whether such conditions could have caused left-handed serine to become dominant. For the moment, he said, he is attracted by the simplicity of the concept.
"There has been a great deal of speculation on how left-handed chirality developed in living organisms, but no agreement about how it happened or how the initial choices were passed on," he said. "The serine theory gives us a simple, coherent picture of one key process chiral transmission involved in the origin of life."
This research was funded in part by the National Science Foundation and the U.S. Department of Energy.
Cooks is associated with several research centers located at or affiliated with Purdue, including the Bindley Biosciences Center, the Indiana Instrumentation Institute, Inproteo (formerly the Indiana Proteomics Consortium) and the Center for Sensing Science and Technology.
Writer: Chad Boutin, (765) 494-2081, firstname.lastname@example.org
Source: R. Graham Cooks, (765) 494-5263, email@example.com
Purdue News Service: (765) 494-2096; firstname.lastname@example.org
A publication-quality graphic is available at http://ftp.purdue.edu/pub/uns/cooks.jpeg.
Serine Octamer Reactions:
Zoltan Takats, Sergio C. Nanita,
In the beginning the origin of life involved a series of homochiral chemical reactions. Some of these may have involved serine and its homochiral octamer, as shown. Many of these reactions occur in a chirally selective fashion. The chiral exchange reactions favor the enantiomers present in modern life (l-amino acids, d-sugars). More information on the homochiral serine octamer and its role in the prebiotic mechanisms that led to the origin of life are given by R. G. Cooks et al.