Birck Nanotechnology Center

BNC CTSI Core Publications

1. J-L. Lozano, D. Kiracofe, J. Melcher, R. Garcia, A. Raman, “Calibration of higher-eigenmode spring constants of atomic force microscope cantilevers”, Nanotechnology, 2010, accepted.

2. J-W Lee, A. Mahopatro, D. Peroulis, A. Raman, “Vibration based monitoring and diagnosis of dielectric charging in RF-MEMS switches”, IEEE-ASME Journal of Micro-electromechanical Systems, accepted, 2010.

3. A. Jana, A. Raman, “Hydrodynamic impedance of vibrating disks in fluids: viscous vs. acoustic effects”, accepted, ASME Journal of Vibration and Acoustics, 2010.

4. D. Kiracofe, A. Raman, “Microcantilever dynamics in atomic force microscopy when using higher order eigenmodes in liquid environments”, Journal of Applied Physics, 108, 034320, 2010.

5. L. Biedermann, R. Tung, A. Raman, R. Reifenberger, M. Yazdanpanah, R. Cohn, “Characterization of silver-gallium nanowires for force and mass sensing applications”, Nanotechnology, 21(30), 305701, 2010.

6. M. Spletzer, R. Reifenberger, A. Raman, “Spatio-temporal dynamics of microcantilevers tapping on samples observed under an atomic force microscope integrated with a scanning laser Doppler vibrometer: applications to proper orthogonal decomposition and model reduction”, Journal of Micromechanics and Microengineering, 20(8), 085024, 2010.

7. R. Guo, E. C. Kinzel, Y. Li, S. M. Uppuluri, A. Raman, X. F. Xu, “Three dimensional mapping of optical near field of a nanoscale bowtie antenna”, Optics Express, 18(5), 4961, 2010.

8. R. Tung, T. Wutscher, D. Martinez-Martin, R. Reifenberger, F. Giessibl, A. Raman, “Higher-order eigenmodes of qPlus sensors for high resolution dynamic atomic force microscopy”, accepted, Journal of Applied Physics, 2010.

9. X. Zhang, A. Raman, T. Fisher, T. Sands, “Linear Coefficient of Thermal Expansion of Porous Anodic Alumina Thin Films from Atomic Force Microscopy”, Nanoscale and Microscale Thermophysical Engineering, 13(4), 243-252, 2010.

10. M. C. Strus, A. Raman, “Identification of multiple oscillation states of carbon nanotube tipped cantilevers interacting with surfaces in dynamic atomic force microscopy”, 80(22), 224105, Physical Review B, 2010.

11. X. Xu, J. Melcher, A. Raman, “Accurate force spectroscopy in tapping mode atomic force microscopy in liquids”, 81, 035407, Physical Review B, 2010.

12. D. Kiracofe, A. Raman, “On eigenmodes, stiffness, and sensitivity of atomic force microscope cantilevers in air versus liquids”, 10, 7033506, Journal of Applied Physics, 2010.

13. R. Lahiji, X. Xu, R. Reifenberger, A. Raman, A. Rudie, R. B. Moon, “Atomic Force Microscopy characterization of cellulose nanocrystals”, Langmuir, 26(6), 4480, 2010.

14. M.-H. Ham*, J.H. Choi*, A.A. Boghossian*, E.S. Jeng, R.A. Graff, D.A. Heller, A.C. Chang, A. Mattis, T.H. Bayburt, Y.V. Grinkova, A.S. Zeiger, K.V. Vliet, E.K. Hobbie, S.G. Sligar, C.A. Wraight, and M.S. Strano, “Photoelectrochemical Complexes for Solar Energy Conversion that Chemically and Autonomously Self-Regenerate”, Nature Chemistry, 2010, 2, in-press.

15. J.-H. Han, G.L.C. Paulus, R. Maruyama, D.A. Heller, W.J. Kim, P.W. Barone, C.Y. Lee, J.H. Choi, M.-H. Ham, C. Song, C. Fantini, and M.S. Strano, “Exciton Antennae and Concentrators from Core-Shell and Corrugated Carbon Nanotube Filaments of Homogeneous Composition”, Nature Materials, 2010, 9, in-press.

16. B.A. Baker and J.H. Choi, “Oligonucleotide DNA and RNA as Direct Capping Ligand for Nanocrystals: An Emerging Method for Biological Diagnostics and Therapeutics”, Nano, 2009, 4, 189-199.

17. Geheb, B., Grafton, M., Jang, J., Reece, L.M., Leary, J.F., Jung, B. “Low-Noise Wide Dynamic Range Readout Circuit for Multi-stage Microfluidic Cell Sorting System”, IEEE/NIH LiSSA 2009, pp 40-43, April 2009.

18. Zordan, M.D., Grafton, M.M., Acharya, G., Reece, L.M., Aronson, A.I., Park,K., Leary, J.F. A microfluidic-based hybrid SPR/molecular imaging biosensor for the multiplexed detection of food-borne pathogens. Proceedings of the SPIE, Volume 7167, pp. 716706-716706-10 (2009).

19. Grafton, M.M., Geheb, B., Jang, J-H, Chuang, H-S, Rajdev, P., Reece, L.M., Irazoqui, P.P., Wereley, S.T., Byunghoo Jung, B., Leary, J.F. Microfabrication of a Two- Stage BioMEMS Microfluidic Cell Sorter. Proc. of SPIE Vol. 7207, 7207A1-7207A9 (2009)

20. Zordan, M.D., Grafton, M.M., Acharya, G., Reece, L.M., Cooper, C.L., Aronson, A.I., Park, K., Leary, J.F. Detection of Pathogenic E. coli O157:H7 by a Hybrid Microfluidic SPR and Molecular Imaging Cytometry Device. Cytometry Part A 75A: 155- 162 (2009).

21. Grafton, M.G., Zordan, M.D., Chuang, H-S, Rajdev, P., Irazoqui, P.P., Wereley, S.T., Jones, A.L., Byrnes, R., Todd, P.W., Leary, J.F. "Portable Microfluidic Cytometer for Whole Blood Cell Analysis" Proc. SPIE 7593: 75930M-1 – 75930M-8 (2010).

22. Zordan, M.D., Grafton, M.G., Park, K., Leary, J.F. "The design of a microfluidic biochip for the rapid multiplexed detection of food-borne pathogens by surface plasmon resonance imaging" Proc. SPIE 7553: 755307-1 - 755307-8 (2010).

23. Reece, L.M., Sanders, L., Guernsey, B.K., Kennedy, D.J., Leary, J.F. "High- Throughput Magnetic Flow Sorting of Human Cells Selected on the Basis of Magnetophoretic Mobility" Proc. SPIE 7568: 75680P-1 – 75680P-12 (2010).

24. Eric S. McLamore, S. Mohanty; J. Shi. J. Claussen. J. L Rickus, S. S Jedlicka. D M Porterfield. (2010) “A self-referencing glutamate biosensor for measuring real time neuronal glutamate flux” J. Neuroscience Methods. 189:14-22.

25. S.S. Jedlicka*, J.L. Rickus, D. Zemlyanov. (2010) “Controllable Surface Expression of Bioactive Peptides Incorporated into a Silica Thin Film Matrix” J. Physical Chemistry. 114(1). p 342 – 344.

26. Stratton, J. Rickus, J. Youngblood (2009) “In vitro biocompatibility studies of the antibacterial copolymer poly(4-vinylpyridine-co-poly(ethylene glycol) methacrylate)- hexylbromide” Biomacromolecules 10 (9), pp 2550–2555

27. D.Jaroch*, M.Ward, J. Rickus, P. Irazoqui (2009) “Magnetic Insertion System for Flexible Electrode Implantation” J. Neuroscience Methods. 183(2):213-222

28. S. Sommakia*, J.L. Rickus, and K.J. Otto (2009) “Effects of adsorbed proteins and an antifouling agent on the impedance of silicon-based neural microelectrodes” IEEE Proceedings of the 31st Annual International IEEE Engineering in Medicine and Biology Conference. paper No. 1221.

29. S. S. Jedlicka*, Maria Dadarlat, Travis J Hassell, Pedro P. Irazoqui, J.L. Rickus, (2009). “Glutamate and GABA release from Immature and Mature Neurons Have Different Dependencies on Stimulation Amplitude and Frequency.” International Journal of Neural Systems. Vol. 19. No. 3. 197-212

30. A. Pierce, S. Sommakia*, J. Rickus, K. Otto. (2009) “Thin-film sol-gel coatings for neural microelectrodes” J. Neuroscience Methods. Volume 180, Issue 1, 30 May 2009, Pages 106-110

31. Editors: Schachter SC, Guttag J, Schiff SJ, Schomer DL Contributing Authors: Akhtari M, Bailey EM, Baptiste SL, Barkley GL, Beggs JM, BĂ©land R, Besio W, Binder DK, Bonato P, Bromfield E, Brunner P, Carlson C, Cash SS, Cole AJ, Commowick O, Devinsky O, Doyle WK, Dunseath R, Engel J Jr, Eskandar E, Frei MG, French J, Gale K, Gallagher A, Graves N, Gross RE, Guttag J, Halgren E, Hochberg L, Hsu D, Hsu M, Iasemidis LD, Irazoqui P, Koka K, Kuzniecky R, Lassonde M, Lepore F, Ludvig N, Madsen J, Mancinelli C, McGlone F, Medveczky G, Medvedev AV, Morrell M, Nguyen K, Osorio I, Pang T, Patel S, Patritti B, Potter SM, Rickus J, Ritaccio AL, Rogawski MA, Rolston JD, Rotenberg A, Rothman SM, Sackellares JC, Schachter SC, Schalk G, Schiff SJ, Shoeb AH, Schomer DL, Strangman GE, Tang HM, Terry RS Jr, Thesen T, Truccolo W, Ulbert I, Warfield S, Zhang Q. 2009 “Advances in the application of
technology to epilepsy: the CIMIT/NIO Epilepsy Innovation Summit.” Epilepsy & Behavior. Sep;16(1):3-46.

32. McLamore, E.S., §Mohanty, S., §Shi, J., §Haque, A., Rickus, J., *Porterfield, D.M. 2010. A self referencing glutamate biosensor for measuring real time neuronal glutamate flux. Journal of Neuroscience methods. (In Press).

33. Claussen, J.C., Kim, S.S., §ul Haque, A., §Artilles, M.S., *Porterfield, D.M., Fisher, T.S. 2010 Electrochemical Glucose Biosensor of Platinum Nanospheres Connected by Carbon Nanotubes.J Diabetes Sci Technol. (In Press).

34. Chatni, M.R., Li, G., *Porterfield, D.M. 2009. Frequency domain fluorescence lifetime optrode system design and instrumentation without a concurrent reference led. Applied Optics. 48: 5528-5536

35. Chatni, R., *Porterfield, D.M. 2009. Development and Application of Self- Referencing Optrodic Sensing Technology for Measuring Biophysical Flux. The Analyst. 134: 2224-2232

36. Aeraj ul Haque, A., Diaz, R.E., *Porterfield, D.M. 2009. Electrical characterization of a single cell ellectoporation biochip with the 2-D scanning vibrating probe. Biomedical Microdevices. 11: 1239-1250 (Distinguished by MedWorm as Biomedical Engineering Top 20)

37. Chatni, R., Maier, D.E., *Porterfield, D.M. 2009. Optimization of Oxygen Sensitive Optical Dye Membrane Polymers for Fluorescent Lifetime based Physiological Biosensing. Sensors and Actuators B. 141: 471-477.

38. Liu, G., Li, Y., Porterfield, D.M. 2009. Genotypic Differences in Potassium Nutrition in Lowland Rice Hybrids. Communications in Soil Science and Plant Analysis, 40: 1803–1821.

39. Porterfield, D.M., §*McLamore, E.R., Banks, M.K. 2009. Microsensor Technology for Measuring H+ Flux in Buffered Media. Sensors and Actuators B. 136: 383-387

40. Claussen, J., Franklin, A., §ul Haque, A., *Porterfield, D.M., *Fisher, T. 2009. Electrochemical Biosensor of Nanocube-Augmented Carbon Nanotube Networks. ACS Nano. 3: 37–44 (Issue Cover Article)

41. McLamore, E.R., *Porterfield, D.M., Banks, M.K. 2009. Non-invasive self- referencing electrochemical sensors for quantifying real time biophysical flux in biofilms. Biotechnology and Bioengineering.102:791-799. (Issue Spotlight Manuscript)

42. Z. Ding, W. B. Song, and *B. Ziaie*, ”Sequential Droplet Manipulation via Vibrating Ratcheted Microchannels, “ /Sensors and Actuators B/, vol. 142, pp. 362-368, 2009.

43. Z. Ding, A. Salim, and *B. Ziaie*, “Selective Nanofiber Deposition through Field- Enhanced Electrospinning,” /Langmuir/, 25(17), pp. 9648–9652, 2009.

44. A. Salim, Z. Ding and* B. Ziaie/, /*“A Micromachined Hydrogel Stamper for Soft Printing of Biomolecules with Adjustable Feature Dimensions/,” Analytical Chemistry, /vol. 81, 4551-4554, 2009/./

45. M. Lei, A. Bladi, E. Nuxoll, R. A. Siegel, and *B. Ziaie*, “Hydrogel-Based Microsensors for Wireless Chemical Monitoring,” /Biomedical Microdevices/, vol. 11, pp.529-538, 2009.

46. Y. Gu, A. P. Dhanarajan, S. L. Hruby, A. Baldi, *B. Ziaie*, and R. A. Siegel, “An Interpenetrating Glass-Thermosensitive Hydrogel Construct Gated Flow Control and Thermofluidic Oscillations ,” /Sensors and Actuators B/, vol. 138, pp. 631- 636, 2009.

47. T. Maleki, S. Mohammadi, and *B. Ziaie*, “*A Nanofluidic Channel with Embedded Transverse Nanoelectrodes**,*” /Nanotechnology/, vol. 20, 105302, 2009.

48. Z. Ding and B. Ziaie/, “/A /p/H-tunable Hydrogel Microlens Array with Temperature-actuated Light-switching Capability/,” Applied Physics Letters, /94, 081111, 2009/./

49. H. Kim, T. Maleki, and *B. Ziaie*, “A Biaxial Stretchable Interconnect With Liquid- alloy-covered Joints on Elastomeric Substrate,” IEEE/ASME J. Microelectromech. Systems/ vol. 18, pp. 138-146, 2009/./

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